About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides056582-5 OLIGOADENYLATE SYNTHETASE
Paelopatides05659EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides05660TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON
Paelopatides05661-
Paelopatides05662-
Paelopatides05663-
Paelopatides05664-
Paelopatides05665RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL
Paelopatides05666REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05667BUCENTAUR RELATED
Paelopatides05668ENZYMATIC POLYPROTEIN-RELATED
Paelopatides05669POL PROTEIN
Paelopatides05670PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides05671-
Paelopatides05672FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides05673CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05674SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides05675LEUCOKININ RECEPTOR-RELATED
Paelopatides05676-
Paelopatides05677BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
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