About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05530LD35087P
Paelopatides05531-
Paelopatides05532PROTEIN CBG26694
Paelopatides05533REVERSE TRANSCRIPTASES
Paelopatides05534REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05535ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1
Paelopatides05536TRANSMEMBRANE PROTEIN 248-LIKE
Paelopatides05537SULFOTRANSFERASE SULT
Paelopatides05538GLUTATHIONE S-TRANSFERASE
Paelopatides05539EPOXIDE HYDROLASE
Paelopatides05540PROTEIN CBG26694
Paelopatides05541-
Paelopatides05542AGAP005574-PA
Paelopatides0554352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides05544-
Paelopatides05545NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Paelopatides05546UNCHARACTERIZED
Paelopatides05547-
Paelopatides05548BETA-TUBULIN COFACTOR D
Paelopatides05549-
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