About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56178DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides56179CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED
Paelopatides56180MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides56181SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides56182SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides56183SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides56184-
Paelopatides56185UNCHARACTERIZED
Paelopatides56186IP13529P
Paelopatides56187-
Paelopatides56188-
Paelopatides56189BUCENTAUR RELATED
Paelopatides56190-
Paelopatides56191E3 UBIQUITIN-PROTEIN LIGASE TM129
Paelopatides56192-
Paelopatides56193-
Paelopatides56194SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides56195N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides56196L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides56197-
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