About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56218-
Paelopatides56219-
Paelopatides56220REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56221ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides56222-
Paelopatides56223REVERSE TRANSCRIPTASES
Paelopatides5622439S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL
Paelopatides5622552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides56226AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides56227BUCENTAUR RELATED
Paelopatides56228BUCENTAUR RELATED
Paelopatides56229-
Paelopatides56230CYTOCHROME P450 FAMILY 4
Paelopatides56231UNCHARACTERIZED
Paelopatides56232SI:CH211-108C17.2-RELATED-RELATED
Paelopatides56233PROTEIN CBG26694
Paelopatides56234SI:CH211-108C17.2-RELATED-RELATED
Paelopatides56235-
Paelopatides56236-
Paelopatides56237SI:CH211-196P9.1-RELATED
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