About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56238B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides56239TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides56240TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides56241-
Paelopatides56242PROTEIN CBG20567
Paelopatides56243-
Paelopatides56244ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Paelopatides56261-
Paelopatides56262-
Paelopatides56263-
Paelopatides56264REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56265ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides56266ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56267-
Paelopatides56268-
Paelopatides56269-
Paelopatides56270REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56271TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN
Paelopatides56272TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN
Paelopatides56273TESTIS-EXPRESSED PROTEIN 33
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