About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55000-
Paelopatides55001HYR DOMAIN-CONTAINING PROTEIN
Paelopatides55002HYR DOMAIN-CONTAINING PROTEIN
Paelopatides55003HYR DOMAIN-CONTAINING PROTEIN
Paelopatides55004FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55005PROTEIN CBG26694
Paelopatides55006FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides55008SPHINGOMYELINASE FAMILY MEMBER
Paelopatides55009ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides55010-
Paelopatides55011TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides55012ENZYMATIC POLYPROTEIN-RELATED
Paelopatides55013-
Paelopatides55014KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides55015-
Paelopatides55016-
Paelopatides55017-
Paelopatides55018-
Paelopatides55019-
Paelopatides55020EPM2A-INTERACTING PROTEIN 1
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