About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54937-
Paelopatides5493841-2 PROTEIN ANTIGEN-RELATED
Paelopatides54939REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54940-
Paelopatides54941DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
Paelopatides54942ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54943ZGC:195170
Paelopatides54944SI:CH211-108C17.2-RELATED-RELATED
Paelopatides54945-
Paelopatides54946ACYL-COA DESATURASE
Paelopatides54947PROTEIN CBG26694
Paelopatides54948T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides54949KREV INTERACTION TRAPPED 1-RELATED
Paelopatides54950-
Paelopatides54951-
Paelopatides54952-
Paelopatides54953TUBULIN POLYGLUTAMYLASE
Paelopatides54954MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides54955PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54956-
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