About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54817INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Paelopatides54818-
Paelopatides54819BUCENTAUR RELATED
Paelopatides54820-
Paelopatides54821-
Paelopatides54822GAG-RELATED PROTEIN
Paelopatides54823-
Paelopatides54824COILED-COIL DOMAIN CONTAINING 198
Paelopatides54825TGF-BETA FAMILY
Paelopatides54826NUCLEAR EXPORT MEDIATOR FACTOR NEMF
Paelopatides54827-
Paelopatides54828REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54829NUCLEAR EXPORT MEDIATOR FACTOR NEMF
Paelopatides54830-
Paelopatides54831PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54832CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54833CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54834-
Paelopatides54835-
Paelopatides54836-
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