About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54797PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides54798ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54799REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54800BUCENTAUR RELATED
Paelopatides54801ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides54802TYROSINE-PROTEIN KINASE
Paelopatides54803PATCHED-RELATED
Paelopatides54804-
Paelopatides548055-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides54806-
Paelopatides54807-
Paelopatides54808PROTEASOME SUBUNIT ALPHA/BETA
Paelopatides54809-
Paelopatides54810OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides54811-
Paelopatides54812-
Paelopatides54813SOLUTE CARRIER FAMILY 39
Paelopatides54814-
Paelopatides54815-
Paelopatides54816-
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