About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54695-
Paelopatides54696-
Paelopatides54697PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54698ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54699PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER
Paelopatides54700VERY KIND PROTEIN
Paelopatides54701FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54702-
Paelopatides54703BUCENTAUR RELATED
Paelopatides54704-
Paelopatides54705-
Paelopatides54706REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54707-
Paelopatides54708-
Paelopatides54709ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54710ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54711HISTONE H2B
Paelopatides54712HISTONE H4
Paelopatides54713HISTONE H3
Paelopatides54714HISTONE H2A
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