About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54735HISTONE H2B
Paelopatides54736HISTONE H4
Paelopatides54737HISTONE H2B
Paelopatides54738HISTONE H4
Paelopatides54739HISTONE H3
Paelopatides54740HISTONE H2A
Paelopatides54741HISTONE H2B
Paelopatides54742HISTONE H4
Paelopatides54743HISTONE H3
Paelopatides54746PROLINE-RICH TRANSMEMBRANE PROTEIN 4-RELATED
Paelopatides54747-
Paelopatides54748PERIAXIN/AHNAK
Paelopatides54749REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54750-
Paelopatides54751CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54752-
Paelopatides54753NECTIN-RELATED
Paelopatides54754ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54755PROTEIN CBG26694
Paelopatides54756-
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