About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54777REVERSE TRANSCRIPTASE
Paelopatides54778TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides54779SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN
Paelopatides54780METALLOPROTEASE INHIBITOR
Paelopatides54781METALLOPROTEASE INHIBITOR
Paelopatides54782METALLOPROTEASE INHIBITOR
Paelopatides54783-
Paelopatides54784METHYLTRANSFERASE-RELATED
Paelopatides54785RAN GTPASE
Paelopatides54786PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54787-
Paelopatides54788PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Paelopatides54789PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Paelopatides54790-
Paelopatides54791BETA TRANSDUCIN-RELATED PROTEIN
Paelopatides54792PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Paelopatides54793REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54794REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54795PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides54796REVERSE TRANSCRIPTASES
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