About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54837YALI0C04136P
Paelopatides54838SPERMATOGENESIS-ASSOCIATED PROTEIN 6 SPATA6
Paelopatides54839DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides54840PROTEIN, PUTATIVE-RELATED
Paelopatides54841TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides54842-
Paelopatides54843-
Paelopatides54844LP04239P
Paelopatides54845-
Paelopatides54846LP04239P
Paelopatides54847-
Paelopatides54848PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54849-
Paelopatides54850-
Paelopatides54851-
Paelopatides54852LORICRIN
Paelopatides54853-
Paelopatides54854-
Paelopatides54855MITOGEN-ACTIVATED PROTEIN KINASE
Paelopatides54856-
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