About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53422RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides53423PROTEIN MAELSTROM HOMOLOG
Paelopatides53424-
Paelopatides53425NETRIN RECEPTOR UNC5
Paelopatides53426INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Paelopatides53427-
Paelopatides53428DNA POLYMERASE
Paelopatides53429-
Paelopatides53430-
Paelopatides53431UNCHARACTERIZED
Paelopatides53432PROTEIN, PUTATIVE-RELATED
Paelopatides53433PARANEOPLASTIC ANTIGEN
Paelopatides53434SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53435-
Paelopatides53436OS04G0629600 PROTEIN
Paelopatides53437-
Paelopatides53438F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53439-
Paelopatides53440PARANEOPLASTIC ANTIGEN
Paelopatides53441POL PROTEIN
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