About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52918EPM2A-INTERACTING PROTEIN 1
Paelopatides52919EPM2A-INTERACTING PROTEIN 1
Paelopatides52920EPM2A-INTERACTING PROTEIN 1
Paelopatides52921-
Paelopatides52922T-LYMPHOCYTE ACTIVATION ANTIGEN
Paelopatides52923ENZYMATIC POLYPROTEIN-RELATED
Paelopatides52924SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides52925B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52926B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52927-
Paelopatides52928B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52929B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52930B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52931B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52932B30.2/SPRY DOMAIN-CONTAINING PROTEIN
Paelopatides52935GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides52936-
Paelopatides52937EXPRESSED PROTEIN
Paelopatides52938-
Paelopatides52939-
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