About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51250-
Paelopatides51251-
Paelopatides51252-
Paelopatides51253-
Paelopatides51254FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51255FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51256ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51257NUCLEAR PORE COMPLEX PROTEIN NUP155
Paelopatides51258-
Paelopatides51259-
Paelopatides51260REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51261TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides51262PEPTIDASE
Paelopatides51263CD59 GLYCOPROTEIN
Paelopatides51264REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51265UNCHARACTERIZED
Paelopatides51266UNCHARACTERIZED
Paelopatides51267CENTROSOMAL PROTEIN KIZUNA
Paelopatides51268-
Paelopatides51269MYOSIN HEAVY CHAIN - RELATED
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