About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50147-
Paelopatides50148-
Paelopatides50149-
Paelopatides50150-
Paelopatides50151-
Paelopatides50152-
Paelopatides50153-
Paelopatides50154-
Paelopatides50155-
Paelopatides50156PHOSPHATE TRANSPORTER
Paelopatides50157-
Paelopatides50158UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN
Paelopatides50159AGAP002036-PA
Paelopatides50160ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides50161LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides50162ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50163GABA-B RECEPTOR
Paelopatides50164GALECTIN
Paelopatides50165GALECTIN
Paelopatides50166CELL DIVISION CYCLE ASSOCIATED PROTEIN 4/SERTA DOMAIN-CONTAINING PROTEIN 2
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