About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50167-
Paelopatides50168ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides50169PROTEIN CBG26694
Paelopatides50170PROTEIN CBG26694
Paelopatides50171POL PROTEIN
Paelopatides50172IRE1-RELATED
Paelopatides50173-
Paelopatides50174SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides50177CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides50178-
Paelopatides50179-
Paelopatides50180-
Paelopatides50181-
Paelopatides50182-
Paelopatides50183-
Paelopatides50184SHISA
Paelopatides50185-
Paelopatides50186SLR1189 PROTEIN
Paelopatides50189RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides50190REVERSE TRANSCRIPTASES
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