About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50191BUCENTAUR RELATED
Paelopatides50192ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50193PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC
Paelopatides50194TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides50195-
Paelopatides50196SI:CH211-108C17.2-RELATED-RELATED
Paelopatides50197AGAP005574-PA
Paelopatides50198AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides50199IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides50200IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides50201VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Paelopatides50202-
Paelopatides50203-
Paelopatides50204TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 1
Paelopatides50206-
Paelopatides50208APOLIPOPROTEIN L
Paelopatides50209PROTEIN CBG26694
Paelopatides50210SI:CH211-108C17.2-RELATED-RELATED
Paelopatides50211ZGC:195170
Paelopatides50212-
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