About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49663ACYL-COA SYNTHETASE
Paelopatides49665GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1
Paelopatides49666-
Paelopatides49667DUAL SPECIFICITY PROTEIN PHOSPHATASE
Paelopatides49668MYOGENIC FACTOR
Paelopatides49669NERVE GROWTH FACTOR NGF -RELATED
Paelopatides49670PROTEIN CBG26694
Paelopatides49671GAG-RELATED PROTEIN
Paelopatides49672-
Paelopatides49673-
Paelopatides49674POL PROTEIN
Paelopatides49675CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1
Paelopatides49676-
Paelopatides49677SUCCINYL-COA SYNTHETASE BETA CHAIN
Paelopatides49678-
Paelopatides49679ARM_2 DOMAIN-CONTAINING PROTEIN
Paelopatides49680STAR-RELATED LIPID TRANSFER PROTEIN 9
Paelopatides49681SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides49682HEMOGLOBINASE FAMILY MEMBER
Paelopatides49683HEMOGLOBINASE FAMILY MEMBER
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