About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49640ORF PROTEIN
Paelopatides49641HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides49643-
Paelopatides49644-
Paelopatides49645NAD KINASE
Paelopatides49647PROTEIN CBG26694
Paelopatides49649-
Paelopatides49650CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49651REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49652POL PROTEIN
Paelopatides49653-
Paelopatides49654DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides49655SI:CH211-108C17.2-RELATED-RELATED
Paelopatides49656-
Paelopatides49657THIOESTERASE SUPERFAMILY MEMBER-RELATED
Paelopatides49658FI04643P-RELATED
Paelopatides49659CRUMBS FAMILY MEMBER
Paelopatides49660-
Paelopatides49661-
Paelopatides49662-
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