About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49568NETRIN RECEPTOR UNC5
Paelopatides49569-
Paelopatides49570-
Paelopatides49575G PROTEIN-COUPLED RECEPTOR 157-RELATED
Paelopatides49576-
Paelopatides49577ACYL-COA SYNTHETASE
Paelopatides49578-
Paelopatides49579NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides49580CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49581-
Paelopatides49582ACROSIN-RELATED
Paelopatides49583-
Paelopatides49584ANKYRIN REPEAT CONTAINING
Paelopatides49585OS01G0621700 PROTEIN
Paelopatides49586MYOSIN
Paelopatides49587MYOSIN
Paelopatides49588REVERSE TRANSCRIPTASE
Paelopatides49589-
Paelopatides49592FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49593FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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