About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49616CRUMBS FAMILY MEMBER
Paelopatides49617FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49618FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49619INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides49620ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides49621-
Paelopatides49623AMMONIUM TRANSPORTER
Paelopatides49624PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides49625-
Paelopatides49626LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11
Paelopatides49627REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49628ACTIN
Paelopatides49629-
Paelopatides49630-
Paelopatides49634-
Paelopatides49635-
Paelopatides49636DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
Paelopatides49637CARNITINE O-ACYLTRANSFERASE
Paelopatides49638-
Paelopatides4963952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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