About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49505F-BOX ONLY PROTEIN 33
Paelopatides49506UNCHARACTERIZED
Paelopatides49507PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides49508-
Paelopatides49509RETROTRANSPOSON
Paelopatides49510PROTEIN CBG26694
Paelopatides49511-
Paelopatides49512-
Paelopatides49513PROTEIN TFG
Paelopatides49514-
Paelopatides49515-
Paelopatides49516TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides49519F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49520HEMOPEXIN DOMAIN-CONTAINING PROTEIN
Paelopatides49521-
Paelopatides49522-
Paelopatides49523-
Paelopatides49524-
Paelopatides49525HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides49526-
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