About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides4939952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides49400ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides49401MYOSIN REGULATORY LIGHT CHAIN 2
Paelopatides49402-
Paelopatides49403SI:CH211-108C17.2-RELATED-RELATED
Paelopatides49404OVOCHYMASE-RELATED
Paelopatides49405OVOCHYMASE-RELATED
Paelopatides49406OVOCHYMASE-RELATED
Paelopatides49407NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides49408-
Paelopatides49409SIDESTEP PROTEIN
Paelopatides49411-
Paelopatides49412-
Paelopatides49413-
Paelopatides49414TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING
Paelopatides49415FUMARATE HYDRATASE-RELATED
Paelopatides49416UNCHARACTERIZED
Paelopatides49417STAR-RELATED LIPID TRANSFER PROTEIN 9
Paelopatides49418L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides49419REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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