About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04807-
Paelopatides04808ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides04809PROTEIN CBG26694
Paelopatides04810-
Paelopatides04811-
Paelopatides04812ENDONUCLEASE-RELATED
Paelopatides04813GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN PFC0235W
Paelopatides04814POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2
Paelopatides04815-
Paelopatides04816-
Paelopatides04817OVOCHYMASE-RELATED
Paelopatides04818-
Paelopatides04819KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Paelopatides04820PARANEOPLASTIC ANTIGEN
Paelopatides04821PARANEOPLASTIC ANTIGEN
Paelopatides04822TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides04823ENDONUCLEASE-RELATED
Paelopatides04824-
Paelopatides04825-
Paelopatides04826ARYL HYDROCARBON RECEPTOR
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