About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04787HOMEO BOX HB9 LIKE A-RELATED
Paelopatides04788-
Paelopatides04789PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides04790-
Paelopatides04791-
Paelopatides04792PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides04793-
Paelopatides04794WD REPEAT DOMAIN-CONTAINING FAMILY
Paelopatides04795-
Paelopatides04796UBIQUITIN THIOESTERASE
Paelopatides04797METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides04798-
Paelopatides04799PROTEIN CBG26694
Paelopatides04800-
Paelopatides04801ENZYMATIC POLYPROTEIN-RELATED
Paelopatides04802EXPRESSED PROTEIN
Paelopatides04803-
Paelopatides04804-
Paelopatides04805-
Paelopatides04806-
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