About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04704SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides04705-
Paelopatides04706MALE FERTILITY FACTOR KL5
Paelopatides04707FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides04708-
Paelopatides04709-
Paelopatides04710-
Paelopatides04711POL PROTEIN
Paelopatides04712POLYPROTEIN, PUTATIVE-RELATED
Paelopatides04713HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides04715PR DOMAIN ZINC FINGER PROTEIN
Paelopatides04717-
Paelopatides04718ZINC FINGER PROTEIN
Paelopatides04719CYSTEINE DIOXYGENASE
Paelopatides04720-
Paelopatides04721FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04722ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1
Paelopatides04723LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides04724REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides04725RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE
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