About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49230-
Paelopatides49231-
Paelopatides49232ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides49233CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Paelopatides49234-
Paelopatides4923560S RIBOSOMAL PROTEIN L37
Paelopatides49236ATP SYNTHASE DELTA/EPSILON CHAIN
Paelopatides49237CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
Paelopatides49238-
Paelopatides49239GLUTATHIONE PEROXIDASE
Paelopatides49240TRANSPOSON
Paelopatides49241UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN
Paelopatides49242-
Paelopatides49243-
Paelopatides49244-
Paelopatides49245MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides49246ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides49247BONUS, ISOFORM C-RELATED
Paelopatides49248-
Paelopatides49249-
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