About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49168NETRIN/LAMININ-RELATED
Paelopatides49169NETRIN/LAMININ-RELATED
Paelopatides49170-
Paelopatides49171FER-1-LIKE
Paelopatides49172SIDEROFLEXIN
Paelopatides49173SIDEROFLEXIN
Paelopatides49174SODIUM/NUCLEOSIDE COTRANSPORTER
Paelopatides49175SODIUM/NUCLEOSIDE COTRANSPORTER
Paelopatides49176PROTEIN CBG26694
Paelopatides49177PINSTRIPE, ISOFORM A
Paelopatides49178PINSTRIPE, ISOFORM A
Paelopatides49179PINSTRIPE, ISOFORM A
Paelopatides49180COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides49181DIMETHYLANILINE MONOOXYGENASE
Paelopatides49182SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
Paelopatides49183SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
Paelopatides49184GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
Paelopatides49185CATION-TRANSPORTING ATPASE-RELATED
Paelopatides49186REVERSE TRANSCRIPTASES
Paelopatides49187UNCHARACTERIZED
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