About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49188JTB PROTEIN-RELATED
Paelopatides49189REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
Paelopatides49190REVERSE TRANSCRIPTASES
Paelopatides49191-
Paelopatides49192REVERSE TRANSCRIPTASES
Paelopatides49193-
Paelopatides49194REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
Paelopatides49195-
Paelopatides49196EXS-RELATED PROTEIN
Paelopatides49197-
Paelopatides49198PROTEIN, PUTATIVE-RELATED
Paelopatides49199FORMIN-J
Paelopatides49200PR DOMAIN ZINC FINGER PROTEIN
Paelopatides49203REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49204FI04643P-RELATED
Paelopatides49205ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49206-
Paelopatides49207-
Paelopatides49208-
Paelopatides49209-
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