About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49250-
Paelopatides49251-
Paelopatides49252-
Paelopatides49253ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49254-
Paelopatides49255-
Paelopatides49256ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Paelopatides49260-
Paelopatides49261IMPORTIN BETA
Paelopatides49262ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides49263DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED
Paelopatides49264-
Paelopatides49265PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides49266-
Paelopatides49267VILLIN
Paelopatides49268-
Paelopatides49269CARBAMOYLTRANSFERASE FAMILY MEMBER
Paelopatides49270NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN
Paelopatides49271NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN
Paelopatides49272-
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