About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48415-
Paelopatides48416-
Paelopatides48417-
Paelopatides48418REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48419REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48420CHOLINE/ETHANOALAMINE KINASE
Paelopatides48421S-ADENOSYL-METHYLTRANSFERASE MRAW
Paelopatides48422-
Paelopatides48423-
Paelopatides48424NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1
Paelopatides48425-
Paelopatides48426-
Paelopatides48427-
Paelopatides48428L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides48429CENTROSOMAL PROTEIN 2
Paelopatides48430CRUMBS FAMILY MEMBER
Paelopatides48431NOTCH LIGAND FAMILY MEMBER
Paelopatides48432PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides48433ADENINE PHOSPHORIBOSYLTRANSFERASE
Paelopatides48434TRANSPOSASE, PUTATIVE-RELATED
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