About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48290-
Paelopatides48291ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Paelopatides48292ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Paelopatides48293-
Paelopatides48294NFAT
Paelopatides48295NUDIX HYDROLASE
Paelopatides48296NUDIX HYDROLASE
Paelopatides48297SHC SH2-DOMAIN BINDING PROTEIN 1-RELATED
Paelopatides48298ENDONUCLEASE
Paelopatides48299BUCENTAUR RELATED
Paelopatides48300UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL
Paelopatides48301-
Paelopatides48302-
Paelopatides48303PROTEIN CBG26694
Paelopatides48304PROTEIN CBG26694
Paelopatides48305-
Paelopatides48306-
Paelopatides48309-
Paelopatides48310PROTEIN CBG26694
Paelopatides48311-
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