About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48249-
Paelopatides48250HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides48251STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Paelopatides48252STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Paelopatides48253UNNAMED PRODUCT
Paelopatides48254LD44762P
Paelopatides48255LD44762P
Paelopatides48256-
Paelopatides48257EPM2A-INTERACTING PROTEIN 1
Paelopatides48258EPM2A-INTERACTING PROTEIN 1
Paelopatides48259EPM2A-INTERACTING PROTEIN 1
Paelopatides48260RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides48261INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides48262-
Paelopatides48263-
Paelopatides48264BUCENTAUR RELATED
Paelopatides48265REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48266OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides48267FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48268RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED
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