About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides4835214-3-3 PROTEIN
Paelopatides4835314-3-3 PROTEIN
Paelopatides48354PROTEIN CBG26694
Paelopatides48355EPM2A-INTERACTING PROTEIN 1
Paelopatides48356POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides48357RING FINGER DOMAIN-CONTAINING
Paelopatides48358HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides48359EPSIN/ENT-RELATED
Paelopatides48360-
Paelopatides48361METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
Paelopatides4836228S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Paelopatides48363ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides48364DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides48365CHAPERONIN
Paelopatides48366TRANSCRIPTION FACTOR COE FAMILY MEMBER
Paelopatides48367-
Paelopatides48368-
Paelopatides48369-
Paelopatides48370-
Paelopatides48371TNF RECEPTOR ASSOCIATED FACTOR
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