About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48394PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14
Paelopatides48395PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14
Paelopatides48396F-BOX ONLY PROTEIN 42
Paelopatides48397FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48398FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48399-
Paelopatides48400PROTEIN CBG26694
Paelopatides48401LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11
Paelopatides48402LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11
Paelopatides48403REVERSE TRANSCRIPTASES
Paelopatides48404REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48405-
Paelopatides48406REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48408ACYL-COA DEHYDROGENASE
Paelopatides48409UNCHARACTERIZED
Paelopatides48410-
Paelopatides48411-
Paelopatides48412ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides48413PROTEIN SSUH2 HOMOLOG
Paelopatides48414DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
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