About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04492FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04493ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides04494-
Paelopatides04495-
Paelopatides04496-
Paelopatides04497SI:CH211-196P9.1-RELATED
Paelopatides04498-
Paelopatides04499PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides04500HELICASE
Paelopatides04501CARBOHYDRATE SULFOTRANSFERASE
Paelopatides04502MUCIN-22
Paelopatides04504GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5
Paelopatides04505-
Paelopatides04506DYNEIN REGULATORY COMPLEX SUBUNIT 7
Paelopatides04507UNCHARACTERIZED
Paelopatides04508REVERSE TRANSCRIPTASES
Paelopatides04509-
Paelopatides04510SORBITOL DEHYDROGENASE
Paelopatides04511SORBITOL DEHYDROGENASE
Paelopatides04512-
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