About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04411-
Paelopatides04412-
Paelopatides04413CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides04414ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides04415-
Paelopatides04416-
Paelopatides04417-
Paelopatides04418-
Paelopatides04419-
Paelopatides04420THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides04421UNCHARACTERIZED
Paelopatides044222-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides04423-
Paelopatides04424SORTILIN RELATED
Paelopatides04425-
Paelopatides04426TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides04427PLEXIN
Paelopatides04428UNCHARACTERIZED
Paelopatides04429UNCHARACTERIZED
Paelopatides04430UNCHARACTERIZED
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