About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04329PROTEIN CBG26694
Paelopatides04330-
Paelopatides04331REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides04332-
Paelopatides04333FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04334PROTEIN CBG26694
Paelopatides04335PROTEIN CBG26694
Paelopatides04336-
Paelopatides04337-
Paelopatides04338REVERSE TRANSCRIPTASES
Paelopatides04339BUCENTAUR RELATED
Paelopatides04340DNA2/NAM7 HELICASE FAMILY
Paelopatides04341FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04342PROTEIN CBG26694
Paelopatides04343ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides04344C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides04345-
Paelopatides04346ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Paelopatides04347NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides04348FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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