About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04247ACYL-COA DEHYDROGENASE
Paelopatides04248BONUS, ISOFORM C-RELATED
Paelopatides04249-
Paelopatides04250-
Paelopatides04251POL PROTEIN
Paelopatides04252MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides04253-
Paelopatides04254-
Paelopatides04255MONOCARBOXYLATE TRANSPORTER
Paelopatides04256RETROTRANSPOSON
Paelopatides04257-
Paelopatides04258-
Paelopatides0425960S RIBOSOMAL PROTEIN L18
Paelopatides04260SI:CH211-201H21.5-RELATED
Paelopatides04261UBA-LIKE DOMAIN-CONTAINING PROTEIN 2
Paelopatides04262MAHOGUNIN
Paelopatides04263AMINO ACID TRANSPORTER
Paelopatides04264REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides04265AMINO ACID TRANSPORTER
Paelopatides04266-
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