About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04369CENTROSOMAL PROTEIN 2
Paelopatides04370-
Paelopatides04371-
Paelopatides04372CRUMBS FAMILY MEMBER
Paelopatides04373-
Paelopatides04374-
Paelopatides04375NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides04377VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides04378ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides04379OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides04380NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
Paelopatides04381PROTEASOME SUBUNIT ALPHA/BETA
Paelopatides04382PROTEIN LLP HOMOLOG
Paelopatides04383ACTIN
Paelopatides04384BUCENTAUR RELATED
Paelopatides04385ACTIN
Paelopatides04386SELENOPROTEIN K
Paelopatides04387ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides04388-
Paelopatides04389-
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