About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04556-
Paelopatides04557CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides04558-
Paelopatides04559UBIQUINONE BIOSYNTHESIS PROTEIN
Paelopatides04560EPM2A-INTERACTING PROTEIN 1
Paelopatides04561PROTEIN CBG26694
Paelopatides04562-
Paelopatides04563LEUCOKININ RECEPTOR-RELATED
Paelopatides04564ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides04565GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides04566FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04567PROTEIN, PUTATIVE-RELATED
Paelopatides04568PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides04569PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides04570TRANSPOSON
Paelopatides04571-
Paelopatides04572SEPIAPTERIN REDUCTASE
Paelopatides04573AP ENDONUCLEASE
Paelopatides04574ACETYLCHOLINESTERASE
Paelopatides04575-
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