About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS09151FIBROBLAST GROWTH FACTOR
HS09152CYCLINS
HS09153UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS09154PEROXISOME ASSEMBLY PROTEIN 26
HS09155PROTEIN LLP HOMOLOG
HS09156CORTACTIN AND DREBRIN
HS09157GOLGI-ASSOCIATED PROTEIN GCP360-RELATED
HS09158CALCIUM BINDING PROTEINS
HS09159ORIGIN RECOGNITION COMPLEX SUBUNIT 5
HS09160LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
HS09161UPSET, ISOFORM A
HS09162NADH-UBIQUINONE OXIDOREDUCTASE AGGG SUBUNIT
HS09163PHD/F-BOX CONTAINING PROTEIN
HS09164MALE STERILITY PROTEIN 2-RELATED
HS09165MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
HS09166REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09167REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09168REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09169SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
HS09170GTP-BINDING PROTEIN ALPHA SUBUNIT
HS09171REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09172
HS09173SEMAPHORIN
HS09174PROTEIN FAM180A-RELATED
HS09175MYOTROPHIN
HS091765-HYDROXYTRYPTAMINE RECEPTOR
HS09177PLEIOTROPHIN FAMILY MEMBER
HS09178
HS09179E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS09180POLY [ADP-RIBOSE] POLYMERASE
HS09181TUBBY-RELATED
HS09182RAD9, HUS1, RAD1-INTERACTING NUCLEAR ORPHAN PROTEIN 1
HS09183FORKHEAD BOX PROTEIN M1
HS09184AMINO ACID TRANSPORTER
HS09185
HS09186LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
HS09187ACYL-COA SYNTHETASE
HS09188PROTEIN LIN-7 HOMOLOG
HS09189MYOGENIC FACTOR
HS09190MYOGENIC FACTOR
HS09191RIBOSOMAL PROTEIN S9
HS09192TROPONIN T
HS09193SYNAPTOTAGMIN
HS09194LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
HS09195NADH-CYTOCHROME B5 REDUCTASE
HS09196SYNAPTOTAGMIN
HS09197PROSTATE APOPTOSIS RESPONSE PROTEIN PAR-4
HS09198PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
HS09199
HS09200TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11
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