About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS08901
HS08902ENZYMATIC POLYPROTEIN-RELATED
HS08903NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
HS08904
HS08905NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
HS08906
HS08907ATP-DEPENDENT RNA HELICASE
HS08908PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN
HS08909
HS08910ZINC-FINGERS AND HOMEOBOXES RELATED
HS08911PROTEIN CBG11839-RELATED
HS08912PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS08913NUCLEAR RECEPTOR COACTIVATOR 6
HS08914ZINC FINGER PROTEIN
HS08915GAMMA GLUTAMYL TRANSPEPTIDASE
HS08916DIABETES AND OBESITY REGULATED, ISOFORM G
HS08917DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
HS08918DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
HS08919CELL DIVISION PROTEIN KINASE
HS08920DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C
HS08921ACTIVATOR OF BASAL TRANSCRIPTION 1
HS08922UNCHARACTERIZED
HS08923PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED
HS08924PLEXIN
HS08925REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS08926COILED-COIL DOMAIN-CONTAINING PROTEIN 120 FAMILY MEMBER
HS08927SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4
HS08928C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
HS08929
HS08930ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
HS08931PHD FINGER PROTEIN 20-RELATED
HS08932
HS08933SYNAPTOPHYSIN
HS08934
HS08935MIP04163P
HS08936FACIOGENITAL DYSPLASIA PROTEIN
HS08937REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS08938GOLGI-ASSOCIATED PDZ AND COILED-COIL MOTIF-CONTAINING
HS08939DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
HS08940RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE O
HS08941
HS08942EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
HS08943RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE O
HS08944DEATH DOMAIN-CONTAINING PROTEIN CRADD
HS08945PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS08946CONDENSIN-2 COMPLEX SUBUNIT H2
HS08947
HS08948JITTERBUG, ISOFORM N
HS08949JITTERBUG, ISOFORM N
HS08950JITTERBUG, ISOFORM N
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