About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS08951JITTERBUG, ISOFORM N
HS08952
HS08953INHIBITOR OF GROWTH PROTEIN
HS08954
HS08955UNCHARACTERIZED
HS08956
HS08957CADHERIN-LIKE AND PC-ESTERASE DOMAIN-CONTAINING PROTEIN 1
HS08958WNT RELATED
HS08959UNCHARACTERIZED
HS08960GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1
HS08961ADP RIBOSYLATION FACTOR-RELATED
HS08962
HS08963RAGULATOR COMPLEX PROTEIN LAMTOR4
HS08964VACUOLAR ATP SYNTHASE SUBUNIT F
HS08965LEUKOTRIENE A-4 HYDROLASE
HS08966SYNAPTIC VESICLE GLYCOPROTEIN 2
HS08967TRANSPORTIN 3 AND IMPORTIN 13
HS08968
HS08969INTERFERON REGULATORY FACTOR
HS08970G-PROTEIN COUPLED RECEPTOR
HS08971IKB KINASE
HS08972
HS08973LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
HS08974VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
HS08975VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
HS08976PARATHYROID HORMONE-RELATED
HS08977
HS08978
HS08979GENE, 49416-RELATED
HS08980
HS0898160S RIBOSOMAL PROTEIN L18A
HS08982EXPORTIN-T/LOS1
HS08983UNCHARACTERIZED
HS08984F-BOX ONLY PROTEIN 7
HS08985ZGC:172139
HS08986RAN BINDING PROTEIN
HS08987PHD FINGER PROTEIN
HS08988
HS08989RHO GTPASE-ACTIVATING PROTEIN 68F
HS08990VOLTAGE-GATED POTASSIUM CHANNEL
HS08991VOLTAGE-GATED POTASSIUM CHANNEL
HS08992HISTONE H2B
HS08993HISTONE H4
HS08994HISTONE H1
HS08995HISTONE H2B
HS08996HISTONE H3
HS08997HISTONE H4
HS08998HISTONE H2A
HS08999
HS09000HISTONE H2A
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