About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS09101METHIONINE AMINOPEPTIDASE 2
HS09102UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS09103NETRIN/LAMININ-RELATED
HS09104SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
HS09105IMIDAZOLONEPROPIONASE
HS09106TETRASPANIN
HS09107PROTEIN CBG13728
HS09108KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
HS09109ASPARTYL PROTEASE DDI-RELATED
HS09110INTEGRIN ALPHA REPEAT DOMAIN-CONTAINING
HS09111BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
HS09112LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN
HS09113REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09114
HS09115AROMATIC AMINO ACID HYDROXYLASE
HS09116AROMATIC AMINO ACID HYDROXYLASE
HS09117NUCLEOPORIN NUP37 P37 -RELATED
HS09118PCNA-INTERACTING PARTNER
HS09119INSULIN-LIKE GROWTH FACTOR I
HS09120KRAB AND ZINC FINGER DOMAIN-CONTAINING
HS09121ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING
HS09122SI:CH211-196P9.1-RELATED
HS09123RGD1561648
HS09124APOPTOTIC PROTEASE-ACTIVATING FACTOR 1
HS09125ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
HS09126
HS09127UNCHARACTERIZED
HS09128CYTOSKELETON-ASSOCIATED PROTEIN 4
HS09129INHIBITOR OF NUCLEAR FACTOR KAPPA-B KINASE-INTERACTING PROTEIN
HS09130INHIBITOR OF NUCLEAR FACTOR KAPPA-B KINASE-INTERACTING PROTEIN
HS09131PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
HS09132
HS09133TUBULIN POLYGLUTAMYLASE
HS09134
HS09135MALONYL-COA ACP TRANSACYLASE, ACP-BINDING
HS09136TETRASPANIN
HS09137IP01015P-RELATED
HS09138PROTEIN AD-016-RELATED
HS09139FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
HS09140-
HS09141ETHANOLAMINEPHOSPHOTRANSFERASE
HS09142TITIN
HS09143ETS
HS09144ETS
HS09145
HS09146ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
HS09147ADENOSINE DEAMINASE
HS09148
HS09149RAD51/NUKS-INTERACTING PROTEIN
HS09150FIBROBLAST GROWTH FACTOR
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