The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000227l.9 | GLYCOPROTEIN HORMONE RECEPTOR |
| PMEG.utg000228l.1 | NUCLEOSIDE DIPHOSPHATE KINASE 7 |
| PMEG.utg000228l.2 | PR DOMAIN ZINC FINGER PROTEIN |
| PMEG.utg000228l.3 | GLR0591 PROTEIN |
| PMEG.utg000228l.4 | DIACYLGLYCEROL O-ACYLTRANSFERASE |
| PMEG.utg000228l.5 | ARRESTIN |
| PMEG.utg000228l.6 | |
| PMEG.utg000228l.7 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
| PMEG.utg000230l.1 | ADENYLATE CYCLASE TYPE 1 |
| PMEG.utg000230l.2 | PYRIDOXINE-5-PHOSPHATE OXIDASE |
| PMEG.utg000230l.3 | OS05G0300700 PROTEIN |
| PMEG.utg000230l.4 | |
| PMEG.utg000230l.5 | CENTROMERE PROTEIN E |
| PMEG.utg000231l.1 | NEL HOMOLOG |
| PMEG.utg000231l.2 | |
| PMEG.utg000231l.3 | DETERIN |
| PMEG.utg000231l.4 | TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 |
| PMEG.utg000231l.5 | ACTIN |
| PMEG.utg000231l.6 | SAP18 |
| PMEG.utg000231l.7 | |
| PMEG.utg000232l.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| PMEG.utg000232l.2 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| PMEG.utg000232l.3 | NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED |
| PMEG.utg000232l.4 | RHO FAMILY GTPASE |
| PMEG.utg000232l.5 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| PMEG.utg000232l.6 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| PMEG.utg000232l.7 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| PMEG.utg000232l.8 | |
| PMEG.utg000232l.9 | DNA POLYMERASE I |
| PMEG.utg000233l.1 | UNCHARACTERIZED |
| PMEG.utg000233l.2 | BARDET-BIEDL SYNDROME PROTEIN 5 |
| PMEG.utg000233l.3 | ATP-DEPENDENT RNA HELICASE DBP3 |
| PMEG.utg000233l.4 | THYMIDYLATE KINASE |
| PMEG.utg000233l.5 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| PMEG.utg000233l.6 | |
| PMEG.utg000233l.7 | BETA LACTAMASE DOMAIN |
| PMEG.utg000235l.1 | GLR0591 PROTEIN |
| PMEG.utg000235l.2 | PR DOMAIN ZINC FINGER PROTEIN |
| PMEG.utg000235l.3 | BASIC LEUCINE ZIPPER NUCLEAR FACTOR 1 BLZF1 PROTEIN |
| PMEG.utg000235l.4 | NUCLEOSIDE DIPHOSPHATE KINASE 7 |
| PMEG.utg000236l.10 | CARBOHYDRATE SULFOTRANSFERASE |
| PMEG.utg000236l.11 | TYROSINE-PROTEIN KINASE |
| PMEG.utg000236l.12 | 30S RIBOSOMAL PROTEIN S18 |
| PMEG.utg000236l.13 | 39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL |
| PMEG.utg000236l.14 | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A |
| PMEG.utg000236l.15 | DUAL SPECIFICITY PROTEIN KINASE |
| PMEG.utg000236l.16 | DUAL SPECIFICITY PROTEIN KINASE |
| PMEG.utg000236l.17 | EGALITARIAN, ISOFORM B |
| PMEG.utg000236l.18 | CYTOCHROME P450 FAMILY 4 |
| PMEG.utg000236l.19 | MITOCHONDRIAL RIBOSOMAL PROTEIN L37 |
