The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000221l.2 | VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE |
| PMEG.utg000221l.20 | HMG DOMAIN-CONTAINING PROTEIN 4 |
| PMEG.utg000221l.21 | |
| PMEG.utg000221l.22 | |
| PMEG.utg000221l.23 | |
| PMEG.utg000221l.24 | - |
| PMEG.utg000221l.25 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| PMEG.utg000221l.26 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| PMEG.utg000221l.27 | UNCHARACTERIZED |
| PMEG.utg000221l.28 | CELL DIVISION CONTROL PROTEIN 6-RELATED |
| PMEG.utg000221l.29 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| PMEG.utg000221l.3 | PERIAXIN-LIKE |
| PMEG.utg000221l.30 | DOLICHYL GLYCOSYLTRANSFERASE |
| PMEG.utg000221l.31 | ATP-DEPENDENT RNA HELICASE DBP3 |
| PMEG.utg000221l.32 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
| PMEG.utg000221l.33 | ACETYL-COA C-ACETYLTRANSFERASE |
| PMEG.utg000221l.34 | MENORIN (DENDRITIC BRANCHING PROTEIN) |
| PMEG.utg000221l.35 | TRANSPORTIN 3 AND IMPORTIN 13 |
| PMEG.utg000221l.36 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 |
| PMEG.utg000221l.37 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 |
| PMEG.utg000221l.38 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10 |
| PMEG.utg000221l.39 | S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED |
| PMEG.utg000221l.4 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| PMEG.utg000221l.40 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57 |
| PMEG.utg000221l.41 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| PMEG.utg000221l.42 | PHOSPHATIDYLINOSITOL GLYCAN-RELATED |
| PMEG.utg000221l.43 | ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE |
| PMEG.utg000221l.44 | FATTY ACID ACYL TRANSFERASE-RELATED |
| PMEG.utg000221l.45 | UNCHARACTERIZED |
| PMEG.utg000221l.46 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
| PMEG.utg000221l.47 | RWD DOMAIN-CONTAINING PROTEIN 3 |
| PMEG.utg000221l.48 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
| PMEG.utg000221l.49 | FTP DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000221l.5 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| PMEG.utg000221l.50 | SCAVENGER RECEPTOR CLASS F |
| PMEG.utg000221l.51 | SCAVENGER RECEPTOR CLASS F |
| PMEG.utg000221l.52 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000221l.53 | GUANYLYL CYCLASE |
| PMEG.utg000221l.54 | LD44762P |
| PMEG.utg000221l.55 | |
| PMEG.utg000221l.56 | IMPORTIN BETA |
| PMEG.utg000221l.6 | CALCIUM BINDING PROTEINS |
| PMEG.utg000221l.7 | CALCIUM BINDING PROTEINS |
| PMEG.utg000221l.8 | COLLAGEN ALPHA |
| PMEG.utg000221l.9 | COLLAGEN ALPHA |
| PMEG.utg000222l.1 | |
| PMEG.utg000222l.10 | COLLAGEN ALPHA |
| PMEG.utg000222l.11 | COLLAGEN ALPHA |
| PMEG.utg000222l.12 | COLLAGEN ALPHA |
| PMEG.utg000222l.13 | COLLAGEN ALPHA |
