The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000219l.33 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
| PMEG.utg000219l.34 | UBIQUINONE BIOSYNTHESIS PROTEIN |
| PMEG.utg000219l.35 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000219l.36 | SRCR DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000219l.37 | DOPAMINE BETA HYDROXYLASE RELATED |
| PMEG.utg000219l.38 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| PMEG.utg000219l.39 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| PMEG.utg000219l.4 | DC11 ACN9 HOMOLOG |
| PMEG.utg000219l.40 | |
| PMEG.utg000219l.41 | |
| PMEG.utg000219l.42 | SOLUTE CARRIER FAMILY 5 |
| PMEG.utg000219l.43 | |
| PMEG.utg000219l.44 | |
| PMEG.utg000219l.45 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| PMEG.utg000219l.46 | PROTEIN C10 |
| PMEG.utg000219l.47 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
| PMEG.utg000219l.48 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
| PMEG.utg000219l.49 | L-CYSTEINE DESULFHYDRASE |
| PMEG.utg000219l.5 | NUCLEOPORIN-LIKE PROTEIN 2 |
| PMEG.utg000219l.50 | GEM-ASSOCIATED PROTEIN 4 |
| PMEG.utg000219l.52 | HYR DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000219l.53 | - |
| PMEG.utg000219l.54 | RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000219l.55 | |
| PMEG.utg000219l.56 | |
| PMEG.utg000219l.57 | |
| PMEG.utg000219l.59 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| PMEG.utg000219l.6 | LEUCINE RICH REPEAT PROTEIN |
| PMEG.utg000219l.60 | SURFEIT LOCUS PROTEIN |
| PMEG.utg000219l.61 | PREFOLDIN SUBUNIT 6 |
| PMEG.utg000219l.62 | OPSIN |
| PMEG.utg000219l.63 | SI:CH1073-475A24.1 |
| PMEG.utg000219l.64 | |
| PMEG.utg000219l.65 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| PMEG.utg000219l.66 | CYTOKINE RECEPTOR |
| PMEG.utg000219l.67 | SELENOPROTEIN F |
| PMEG.utg000219l.68 | NUCLEOPORIN NUP188 HOMOLOG |
| PMEG.utg000219l.69 | NEURAL PROLIFERATION DIFFERENTIATION AND CONTROL PROTEIN-1 NPDC-1 PROTEIN |
| PMEG.utg000219l.7 | EXTRA SPINDLE POLES 1-RELATED |
| PMEG.utg000219l.70 | DOCKING PROTEIN RELATED |
| PMEG.utg000219l.71 | SURFEIT LOCUS PROTEIN |
| PMEG.utg000219l.72 | |
| PMEG.utg000219l.73 | WD REPEAT DOMAIN 60 |
| PMEG.utg000219l.74 | |
| PMEG.utg000219l.75 | EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM C |
| PMEG.utg000219l.76 | |
| PMEG.utg000219l.77 | XAA-PRO AMINOPEPTIDASE 1 |
| PMEG.utg000219l.78 | SOLUTE CARRIER FAMILY 5 |
| PMEG.utg000219l.79 | ELONGATION FACTOR TU-RELATED |
| PMEG.utg000219l.8 |
